Rina Bao

Summarization

I am an Instructor at Harvard Medical School and Boston Children's Hospital. My research develops AI solutions for early diagnosis and prognosis, with a focus on multimodal learning, clinically grounded AI systems, and foundation models for medical reasoning. My long-term goal is to advance trustworthy, clinically integrated AI systems that transform pediatric healthcare and beyond.

Research Grants Awarded

Thrasher Research Fund Early Career Award ($26,750)
Development of neuroimaging biomarkers for 2-year neurocognitive outcomes in mild neonatal brain injury

Charles A. King Trust Postdoctoral Research Fellowship ($206,200)
Development of neuroimaging biomarkers for 2-year neurocognitive outcomes after neonatal brain injury

Work Experiences & Education

Instructor, Harvard Medical School & Boston Children's Hospital, USA (2025-Present)

Postdoc, Harvard Medical School & Boston Children's Hospital, USA (2021-2025)
Working with Prof. P. Ellen Grant and Prof. Yangming Ou at Harvard Medical School.

Ph.D. in Computer Science, University of Missouri-Columbia, USA
Advisor: Prof. Kannappan Palaniappan and Prof. Wenjun Zeng

B.Eng. in Communication Engineering, Tianjin University, China

Neonatal Brain Injury Challenges

• 
  1st BOston Neonatal Brain Injury Dataset for Hypoxic Ischemic Encephalopathy (BONBID-HIE) Lesion Segmentation Challenge and Workshop, MICCAI 2023

  [Challenge Website]
• 
  2nd BOston Neonatal Brain Injury Dataset for Hypoxic Ischemic Encephalopathy (BONBID-HIE) Lesion Segmentation and Outcome Prediction Challenge and Workshop, MICCAI 2024

  [Challenge Website]

Publication and Preprints

Selected Publications

• 
  Bao, R., et al. "BONBID-HIE 2023: Lesion Segmentation Challenge in BOston Neonatal Brain Injury Data for Hypoxic Ischemic Encephalopathy" IEEE Transactions on Medical Imaging (TMI), 2025,

  [Paper][Project Page]
• 
  Bao, R., et al. "Visual and Domain Knowledge for Professional-level Graph-of-Thought Medical Reasoning" International Conference on Machine Learning (ICML), 2025, Spotlight (Rate 2.6%)

  [Paper][Project Page]
• 
  Bao, R., et al. "BOston Neonatal Brain Injury Data for Hypoxic Ischemic Encephalopathy (BONBID-HIE): I. MRI and Lesion Labeling", Scientific Data 12.1 (2025): 53. (Impact Factor: 8.7)

  [Paper][Project Page]
• 
  Bao, R., et al. "PARADISE: Personalized and regional adaptation for HIE disease identification and segmentation", Medical Image Analysis, Volume 102, 2025, 103419, https://doi.org/10.1016/j.media.2024.103419 (Impact Factor: 11.8).

  [Paper][Project Page]
• 
  Hajilounezhad, T.*, Bao R.*, et al. "Predicting carbon nanotube forest attributes and mechanical properties using simulated images and deep learning", Npj Computational Materials 7 (1), 134, 2021 (* equal contribution) (Impact Factor: 13.0)

  [Paper][Project Page]
• 
  Bao, R., et al."Lightweight SDE-Net Fusing Model-Based and Learned Features for Computational Histopathology", IEEE Journal of Selected Topics in Signal Processing (IEEE JSTSP), vol. 18, no. 6, pp. 1123-1137, Sept. 2024, doi: 10.1109/JSTSP.2024.3470312. (Impact Factor: 13.7)

  [Paper][Project Page]
• 
  Bao, R., et al."AGE2HIE: Transfer Learning from Brain Age to Predicting Neurocognitive Outcome for Infant Brain Injury", ISBI, 2025.

  [Paper][Project Page]
• 
  Rao, A., ..., Bao, R.^†, "Spatial Prior-Guided Boundary and Region-Aware 2D Lesion Segmentation in Neonatal Hypoxic Ischemic Encephalopathy", MICCAI, 2025 (^† Corresponding Author)

  [Paper][Project Page]
• 
  He, S., Bao, R., et al."Relation U-Net", ISBI, 2025.

  [Paper][Project Page]
• 
  Li, J., He, S., Bao, R., et al."Using Off-Target-Disease Data to Improve Target-Disease Lesion Segmentation", ISBI, 2025.

  [Paper][Project Page]
• 
  Bao, R., et al. "DMNet: Dual-stream marker guided deep network for dense cell segmentation and lineage tracking", ICCV Workshop (Best Paper), 2021

  [Paper][Project Page]

Peer-Reviewed Conference Abstracts

• Ou, Y., Kesri, A., Bao, R., et al. "Combining 47 clinical and neuroimaging variables to predict adverse 18-22-month outcomes for Hypoxic Ischemic Encephalopathy in Neonatal Research Network trials", Pediatric Academic Societies Meeting (PAS) 2025

  [Abstract]
• Bao, R., Kesri, A., et al. "2-Year Neurocognitive Outcome Prediction of Hypoxic Ischemic Encephalopathy in Neonates with Brain MRIs", Society for Pediatric Radiology (SPR) 2025

  [Abstract]
• Bao, R., et al. "Maternal Dietary Nutrition Interact With Demographic and Socioeconomic Information To Impact Offspring Neurocognition by Early School Age", Nutrition 2023

  [Abstract]
• Kesri, A., Bao, R., et al. "The role of expert MRI scores in predicting adverse 18-22-month outcomes for Hypoxic Ischemic Encephalopathy in Neonatal Research Network trials", Annual Meeting of American Society of Pediatric Neuroradiology (ASPNR) 2025

  [Abstract]

Professional Activities

• Editor for LNCS proceedings "AI for Brain Lesion Detection and Trauma Video Action Recognition", First BONBID-HIE Lesion Segmentation Challenge and First Trauma Thompson Challenge, Held in Conjunction with MICCAI 2023, Vancouver, BC, Canada, October 16 and 12, 2023, Proceedings
• Bao, R., et al. Book Chapter "Linking Deep Learning, MRI to Brain Disorders" in "Handbook of the Biology and Pathology of Mental Disorders" In: Martin, C.R., Preedy, V.R., Patel, V.B., Rajendram, R. (eds) Handbook of the Biology and Pathology of Mental Disorders. Springer, Cham. https://doi.org/10.1007/978-3-031-32035-4_55-1
• Organizer for the Challenges and Workshops of 1st and 2nd BONBID-HIE for HIE Lesion Segmentation and Outcome Prediction in conjunction with the International Medical Image Computing and Computer Assisted Intervention Conference (MICCAI) 2023 and MICCAI 2024, engaging over 300 participants worldwide.
• Reviewers for CVPR, MICCAI, Frontiers in Neuroscience, Scientific Reports, Pattern Recognition, IEEE Transactions on Biomedical Engineering, IEEE Transactions on Neural Networks and Learning Systems, and others.

Internship

Microsoft Research Asia | Intelligent Multimedia Group | 2018

Teaching Experience

Teaching Assistant, Department of Electrical Engineering and Computer Science, University of Missouri-Columbia

• CMP_SC 3050: Advanced Algorithm Design (>80 undergraduate students) - Fall 2016
• CMP_SC 4850/7850: Computer Networks I (>50 undergraduate & graduate students) - Spring 2016

Awards & Honors

• Nomination for Rising Star in Healthcare, Boston Children's Hospital - 2025
• Best Paper, ICCV Computer Vision for Automated Medical Diagnosis (CVAMD) Workshop - 2021
• Second Place, ISBI 2021 Cell Segmentation and Tracking Challenge - 2021
• Top Graduate Team Prize, NeurIPS SpaceNet7 Challenge - 2020
• Microchip Technology Scholarship - 2014